CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Eucgr.D02083
(
Eucalyptus grandis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Eucgr.D02083
T142844_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.D02083.1
C2H2 ZF
230
252
HQCEVCKKVFRSSQALGGHRVIH
Eucgr.D02083.1
C2H2 ZF
291
313
YECPFCGRVFGNGQALGGHKRSH
Links
Other
C2H2 ZF
family TFs
Other
Eucalyptus grandis
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI3G33100
Brachypodium distachyon
BRADI3G33100
I
0.771
GSMUA_Achr11G21040_001
Musa acuminata
GSMUA_Achr11G21040_001
I
0.765
GSMUA_Achr1G01550_001
Musa acuminata
GSMUA_Achr1G01550_001
I
0.765
GSMUA_Achr4G26920_001
Musa acuminata
GSMUA_Achr4G26920_001
I
0.765
GSMUA_Achr5G15450_001
Musa acuminata
GSMUA_Achr5G15450_001
I
0.765
BGIOSGA016894
Oryza indica
BGIOSGA016894
I
0.759
OB04G28040
Oryza brachyantha
OB04G28040
I
0.759
OBART04G21020
Oryza barthii
OBART04G21020
I
0.759
OLONG_016061
Oryza longistaminata
OLONG_016061
I
0.759
OMERI04G17450
Oryza meridionalis
OMERI04G17450
I
0.759
ONIVA04G19260
Oryza nivara
ONIVA04G19260
I
0.759
OPUNC04G18700
Oryza punctata
OPUNC04G18700
I
0.759
ORGLA04G0180800
Oryza glaberrima
ORGLA04G0180800
I
0.759
ORUFI04G22610
Oryza rufipogon
ORUFI04G22610
I
0.759
OS04G0552700
Oryza sativa
OS04G0552700
I
0.759
TRIUR3_29692
Triticum urartu
TRIUR3_29692
I
0.755