CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000491198
(
Malus domestica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
MDP0000491198
T143225_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000491198
C2H2 ZF
16
38
YVCEICNQGFQRDQNLQMHRRRH
Links
Other
C2H2 ZF
family TFs
Other
Malus domestica
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORUFI08G19690
Oryza rufipogon
ORUFI08G19690
N
0.827
SELMODRAFT_9106
Selaginella moellendorffii
SELMODRAFT_9106
N
0.827
TRIUR3_29419
Triticum urartu
TRIUR3_29419
N
0.827
SELMODRAFT_9109
Selaginella moellendorffii
SELMODRAFT_9109
N
0.779
OB03G19990
Oryza brachyantha
OB03G19990
N
0.768
Sb01g041630
Sorghum bicolor
Sb01g041630
N
0.768
TRIUR3_32144
Triticum urartu
TRIUR3_32144
N
0.768