Pavir.Ca00534 (Panicum virgatum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pavir.Ca00534 T143324_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ca00534.1.p C2H2 ZF 85 109
Pavir.Ca00534.1.p C2H2 ZF 114 138
Pavir.Ca00534.1.p C2H2 ZF 144 168
Pavir.Ca00534.1.p C2H2 ZF 174 198
Pavir.Ca00534.1.p C2H2 ZF 235 260

Links

Other C2H2 ZF family TFs
Other Panicum virgatum TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si022363m.g Setaria italica Si022363m.g N 0.825