CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ea03590
(
Panicum virgatum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Pavir.Ea03590
T143344_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ea03590.1.p
C2H2 ZF
264
286
YSCKLCGKSYSSHQGLGGHAAGH
Pavir.Ea03590.1.p
C2H2 ZF
325
347
HECRKCHKVFPTGVALGGHMRMH
Links
Other
C2H2 ZF
family TFs
Other
Panicum virgatum
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Si004885m.g
Setaria italica
Si004885m.g
N
0.822
Sb03g042290
Sorghum bicolor
Sb03g042290
N
0.790