Pavir.Ga02641 (Panicum virgatum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pavir.Ga02641 T143362_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ga02641.1.p C2H2 ZF 9 32

Links

Other C2H2 ZF family TFs
Other Panicum virgatum TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si009863m.g Setaria italica Si009863m.g N 0.827
GRMZM2G172605 Zea mays GRMZM2G172605 N 0.824
ORUFI04G00820 Oryza rufipogon ORUFI04G00820 N 0.817
ORGLA04G0006300 Oryza glaberrima ORGLA04G0006300 N 0.817
OS04G0115500 Oryza sativa OS04G0115500 N 0.817
OPUNC04G00760 Oryza punctata OPUNC04G00760 N 0.817
OMERI04G00680 Oryza meridionalis OMERI04G00680 N 0.817
ONIVA12G09670 Oryza nivara ONIVA12G09670 N 0.817
BGIOSGA015781 Oryza indica BGIOSGA015781 N 0.817