Pavir.Ib01978 (Panicum virgatum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pavir.Ib01978 T143391_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ib01978.1.p C2H2 ZF 63 85

Links

Other C2H2 ZF family TFs
Other Panicum virgatum TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM2G069176 Zea mays GRMZM2G069176 N 0.827
GRMZM2G113860 Zea mays GRMZM2G113860 N 0.827
Sb01g031890 Sorghum bicolor Sb01g031890 N 0.827
Sb01g031900 Sorghum bicolor Sb01g031900 N 0.827
Si037429m.g Setaria italica Si037429m.g N 0.827
Pavir.J12087 Panicum virgatum Pavir.J12087 N 0.827
Pavir.J37325 Panicum virgatum Pavir.J37325 N 0.827
GRMZM2G106026 Zea mays GRMZM2G106026 N 0.824
LPERR07G17940 Leersia perrieri LPERR07G17940 N 0.785
OBART07G20660 Oryza barthii OBART07G20660 N 0.785
OGLUM07G20440 Oryza glumaepatula OGLUM07G20440 N 0.785
OMERI07G17320 Oryza meridionalis OMERI07G17320 N 0.785
ONIVA07G19100 Oryza nivara ONIVA07G19100 N 0.785
OPUNC07G19500 Oryza punctata OPUNC07G19500 N 0.785
ORGLA07G0158200 Oryza glaberrima ORGLA07G0158200 N 0.785
ORUFI07G21520 Oryza rufipogon ORUFI07G21520 N 0.785
OS07G0590100 Oryza sativa OS07G0590100 N 0.785
MLOC_51405 Hordeum vulgare MLOC_51405 I 0.778