Pavir.J33608 (Panicum virgatum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pavir.J33608 T143430_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J33608.1.p C2H2 ZF 80 102
Pavir.J33608.1.p C2H2 ZF 128 150

Links

Other C2H2 ZF family TFs
Other Panicum virgatum TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si008297m.g Setaria italica Si008297m.g N 0.827
BGIOSGA020503 Oryza indica BGIOSGA020503 N 0.766
OBART06G28040 Oryza barthii OBART06G28040 N 0.766
OGLUM06G29420 Oryza glumaepatula OGLUM06G29420 N 0.766
ONIVA06G31020 Oryza nivara ONIVA06G31020 N 0.766
OPUNC06G25570 Oryza punctata OPUNC06G25570 N 0.766
ORGLA06G0237500 Oryza glaberrima ORGLA06G0237500 N 0.766
ORUFI06G29970 Oryza rufipogon ORUFI06G29970 N 0.766
OS06G0727000 Oryza sativa OS06G0727000 N 0.766