CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AAI68535
(
Xenopus tropicalis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
AAI68535
T143640_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAI68535
C2H2 ZF
14
36
FLCTLCGKSYNHPNSLRRHQMVH
AAI68535
C2H2 ZF
42
64
YKCSHCGKTFNDSGSLKAHERIH
AAI68535
C2H2 ZF
70
92
YTCTQCGKSFIRSSDRNRHMMTH
AAI68535
C2H2 ZF
167
189
FVCTRCGKNFGRKFDLKRHMWIH
AAI68535
C2H2 ZF
195
217
YKCSQCDKKFCKLQDLKTHKKIH
AAI68535
C2H2 ZF
223
242
CIACGKSFRDTFSLRRHTHK
AAI68535
C2H2 ZF
263
285
FSCCLCGKSYNHPHSLRRHQTIH
AAI68535
C2H2 ZF
291
313
YKCSYCEKTFSESGSLRSHERIH
AAI68535
C2H2 ZF
319
341
FTCTQCGKSFIRSSDRNRHMMTH
AAI68535
C2H2 ZF
422
444
LACTQCGKRFSRKYGLIIHMKIH
AAI68535
C2H2 ZF
450
472
YKCSHCDKGFSKLRDLKAHRKIH
Links
Other
C2H2 ZF
family TFs
Other
Xenopus tropicalis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
zgc:173486
Danio rerio
ENSDARG00000100544
N
0.827