CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Contig1001.1.g73
(
Oxytricha trifallax
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Contig1001.1.g73
T143897_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Contig1001.1.g73
C2H2 ZF
168
193
YRCPIEDCPKSYGSEGSLNQHLKLKH
Links
Other
C2H2 ZF
family TFs
Other
Oxytricha trifallax
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Contig18711.0.g38
Oxytricha trifallax
Contig18711.0.g38
N
0.827
GSPATT00018005001
Paramecium tetraurelia
GSPATT00018005001
N
0.767
GSPATT00037878001
Paramecium tetraurelia
GSPATT00037878001
N
0.767
TTHERM_00647360
Tetrahymena thermophila
TTHERM_00647360
N
0.764