CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Contig13002.0.g49
(
Oxytricha trifallax
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Contig13002.0.g49
T143904_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Contig13002.0.g49
C2H2 ZF
212
235
LCPFVVCLKEFSETGNLKTHMRTH
Contig13002.0.g49
C2H2 ZF
241
265
FICTFEGCQKEFITKGHLNTHELIH
Contig13002.0.g49
C2H2 ZF
271
293
FVCERCDKSYSRSGRLKIHMRTH
Contig13002.0.g49
C2H2 ZF
299
323
FECPFDNCEKTFTEKGNLKTHIRIH
Contig13002.0.g49
C2H2 ZF
329
353
YLCSFEGCDKSFTTYGHLTDHVRRH
Contig13002.0.g49
C2H2 ZF
359
381
FACDTCDQTFMRSSSLKIHKRRH
Contig13002.0.g49
C2H2 ZF
387
409
YLCETCNKSFSDRSNHKVHMKTH
Links
Other
C2H2 ZF
family TFs
Other
Oxytricha trifallax
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Contig13451.0.g2
Oxytricha trifallax
Contig13451.0.g2
N
0.827