CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
LCUP002577
(
Lucilia cuprina
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
LCUP002577
T144173_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CG12236
M06125_2.00
Drosophila melanogaster
TGGAAR
YTTCCA
B1H
Zhu et al.(2011)
CG12236-PB_SANGER_2.5_FBgn0029822
0.816
0.955
CG12236
M06126_2.00
Drosophila melanogaster
MVBRATGAACHHVC
GBDDGTTCATYVBK
B1H
Zhu et al.(2011)
CG12236_SANGER_10_FBgn0029822
0.816
0.955
CG12236
M06127_2.00
Drosophila melanogaster
NDNGTTCATYBNNNN
NNNNVRATGAACNHN
B1H
Zhu et al.(2011)
CG12236_SOLEXA_5_FBgn0029822
0.816
0.955
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LCUP002577-PA
C2H2 ZF
424
446
TECQFCKMVITTVNLWRHIRTQH
LCUP002577-PA
C2H2 ZF
453
475
KCELCNKNFKNKYSLREHIRISH
Links
Other
C2H2 ZF
family TFs
Other
Lucilia cuprina
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GG18799
Drosophila erecta
FBgn0111007
I
0.822
GH24374
Drosophila grimshawi
FBgn0131830
I
0.822
GI15314
Drosophila mojavensis
FBgn0138063
I
0.822
GL14892
Drosophila persimilis
FBgn0152496
I
0.822
GJ14749
Drosophila virilis
FBgn0201953
I
0.822
GK20126
Drosophila willistoni
FBgn0222123
I
0.822
GE17561
Drosophila yakuba
FBgn0235018
I
0.822
GA26473
Drosophila pseudoobscura
FBgn0247847
I
0.822
CG12236
Drosophila melanogaster
FBgn0029822
D
0.816