CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LCUP008602
(
Lucilia cuprina
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
LCUP008602
T144282_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
crol
M06116_2.00
Drosophila melanogaster
WCYSYCCCCCYCBCM
KGVGRGGGGGKSRGW
B1H
Zhu et al.(2011)
crol_F7-16_SANGER_5_FBgn0020309
0.801
0.966
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LCUP008602-PA
C2H2 ZF
546
568
HVCDICGKMFAFRYQLIVHRRYH
LCUP008602-PA
C2H2 ZF
574
596
FNCQVCGQGFFTSQDLTRHGKIH
LCUP008602-PA
C2H2 ZF
602
624
FTCLVCFNVFANNASLERHMKRH
LCUP008602-PA
C2H2 ZF
630
652
FACTICQKTFARKEHLENHFRSH
LCUP008602-PA
C2H2 ZF
658
680
FRCQYCAKTFTRKEHMVNHVRKH
LCUP008602-PA
C2H2 ZF
686
708
HRCEICKKSFTRKEHYVNHYMWH
LCUP008602-PA
C2H2 ZF
714
736
HQCEVCGKKYTRKEHLANHMRSH
LCUP008602-PA
C2H2 ZF
742
764
FRCEICGKSFSRKEHFTNHILWH
LCUP008602-PA
C2H2 ZF
770
792
HRCDFCSKTFTRKEHLLNHVRQH
LCUP008602-PA
C2H2 ZF
798
820
HRCTYCMKTFTRKEHLVNHIRQH
LCUP008602-PA
C2H2 ZF
826
848
FKCTYCTKAFTRKDHMVNHVRQH
LCUP008602-PA
C2H2 ZF
854
876
HKCTFCTKTFTRKEHLTNHVRQH
LCUP008602-PA
C2H2 ZF
882
904
HRCSYCKKTFTRKEHLTNHIRLH
LCUP008602-PA
C2H2 ZF
910
932
HKCEYCQKTFTRKEHLNNHMRQH
LCUP008602-PA
C2H2 ZF
938
961
HCCNVCNKPFTRKEHLINHMSRCH
LCUP008602-PA
C2H2 ZF
967
989
FACETCGKSFPLKGNLLFHQRSH
LCUP008602-PA
C2H2 ZF
999
1021
FSCEKCPKTFICKGHLVSHMRSH
LCUP008602-PA
C2H2 ZF
1027
1050
HACTLCSKAFVERGNLKRHMKMNH
Links
Other
C2H2 ZF
family TFs
Other
Lucilia cuprina
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
crol
Drosophila melanogaster
FBgn0020309
D
0.801
TC006693
Tribolium castaneum
TC006693
N
0.757