CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LDEC005898
(
Leptinotarsa decemlineata
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
LDEC005898
T144600_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LDEC005898-PA
C2H2 ZF
209
231
FKCLTCGKDFKQKSTLLQHERIH
LDEC005898-PA
C2H2 ZF
237
259
YGCPECGKRFRQQSHLTQHLRIH
LDEC005898-PA
C2H2 ZF
265
287
YACVYCERTFRQRAILNQHLRIH
LDEC005898-PA
C2H2 ZF
293
315
YECPECGKHFRQKAILNQHVRTH
LDEC005898-PA
C2H2 ZF
485
507
VRCPICQKEFKQKSTLLQHGCIH
LDEC005898-PA
C2H2 ZF
513
535
YPCPECGKRFRQQSHLTQHLRIH
LDEC005898-PA
C2H2 ZF
541
563
YGCVYCGRNFRQRTILNQHLRIH
LDEC005898-PA
C2H2 ZF
569
591
YKCAQCGKDFRQKAILDQHTRTH
LDEC005898-PA
C2H2 ZF
597
621
FCCPMPNCRRRFATEPEVKKHIDNH
Links
Other
C2H2 ZF
family TFs
Other
Leptinotarsa decemlineata
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GB54239
Apis mellifera
GB54239
N
0.821
Cflo_02778--XP_393705.3_APIME
Camponotus floridanus
Cflo_02778--XP_393705.3_APIME
N
0.821
KGM_11078
Danaus plexippus
KGM_11078
N
0.820
NV14623
Nasonia vitripennis
NV14623
N
0.820
L798_11626
Zootermopsis nevadensis
L798_11626
N
0.819
BGIBMGA011610
Bombyx mori
BGIBMGA011610
N
0.818
AAEL008573
Aedes aegypti
AAEL008573
N
0.783
PHUM041520
Pediculus humanus
PHUM041520
N
0.783
ADAC007055
Anopheles darlingi
ADAC007055
N
0.782
ACUA023679
Anopheles culicifacies
ACUA023679
N
0.781
AGAP011544
Anopheles gambiae
AGAP011544
N
0.778
AMEC008113
Anopheles melas
AMEC008113
N
0.778