CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Scas_Contig693.31 *(Saccharomyces castellii)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Scas_Contig693.31	T144965_2.00	Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
SWI5 M00020_2.00	Saccharomyces cerevisiae	NNKGCTGGTHN	NDACCAGCMNN	PBM Badis et al.(2008) SWI5_2037	0.770	0.857
SWI5 M07450_2.00	Saccharomyces cerevisiae	KGCTGGKH	DMCCAGCM	PBM, CSA and or DIP-chip Mathelier et al.(2014) MA0402.1	0.770	0.857
SWI5 M08516_2.00	Saccharomyces cerevisiae	KGCTGGKH	DMCCAGCM	Misc DeBoer et al.(2011) YDR146C_569	0.770	0.857
ACE2 M00033_2.00	Saccharomyces cerevisiae	NTGCTGGBYN	NRVCCAGCAN	PBM Badis et al.(2008) ACE2_2082	0.761	0.825
ACE2 M07463_2.00	Saccharomyces cerevisiae	NGCTGGB	VCCAGCN	PBM, CSA and or DIP-chip Mathelier et al.(2014) MA0267.1	0.761	0.825
ACE2 M08534_2.00	Saccharomyces cerevisiae	NGCTGGBH	DVCCAGCN	Misc DeBoer et al.(2011) YLR131C_1332	0.761	0.825
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Scas_Contig693.31	C2H2 ZF	489	513	FECLYPNCGKHFKRRYNTRSHIQTH
Scas_Contig693.31	C2H2 ZF	519	543	YACDFPNCDKAFVRNHDLVRHKKVH
Scas_Contig693.31	C2H2 ZF	552	568	CGKKFNREDALIVHRSR

Links
Other C2H2 ZF family TFs
Other *Saccharomyces castellii* TFs