SMU15001129 (Schmidtea mediterranea)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SMU15001129 T145083_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
cbt
M03705_2.00 		Drosophila melanogaster
DMCACRCCCMY
RKGGGYGTGKH		 SELEX
Nitta et al.(2015)
cbt_1 		0.773 0.725
cbt
M03706_2.00 		Drosophila melanogaster
RMCRCGCCCMCHH
DDGKGGGCGYGKY		 SELEX
Nitta et al.(2015)
cbt_2 		0.773 0.725
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMU15001129 C2H2 ZF 139 163
SMU15001129 C2H2 ZF 169 193
SMU15001129 C2H2 ZF 199 221

Links

Other C2H2 ZF family TFs
Other Schmidtea mediterranea TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSLACG00000009512 Latimeria chalumnae ENSLACG00000009512 I 0.776
LCUP009846 Lucilia cuprina LCUP009846 I 0.776
cbt Drosophila simulans FBgn0194348 I 0.773
cbt Drosophila erecta FBgn0116778 I 0.773
cbt Drosophila willistoni FBgn0226609 I 0.773
cbt Drosophila yakuba FBgn0233632 I 0.773
MDOA014851 Musca domestica MDOA014851 I 0.773
MDOA003755 Musca domestica MDOA003755 I 0.773
cbt Drosophila melanogaster FBgn0043364 D 0.773
cbt Drosophila sechellia FBgn0171577 I 0.773
tetur19g01530 Tetranychus urticae tetur19g01530 I 0.770
cbt Drosophila mojavensis FBgn0140770 I 0.769
cbt Drosophila virilis FBgn0206865 I 0.769
cbt Drosophila ananassae FBgn0101744 I 0.769
ENSACAG00000012356 Anolis carolinensis ENSACAG00000012356 I 0.768
Sakowv30044439m.g Saccoglossus kowalevskii Sakowv30044439m.g I 0.766
PPAI003307 Phlebotomus papatasi PPAI003307 I 0.760
CPIJ015908 Culex quinquefasciatus CPIJ015908 I 0.760
CpipJ_CPIJ015908 Culex pipiens CpipJ_CPIJ015908 I 0.760
AAEL006609 Aedes aegypti AAEL006609 I 0.760
ENSAMXG00000016240 Astyanax mexicanus ENSAMXG00000016240 I 0.759
SPU_015772 Strongylocentrotus purpuratus SPU_015772 I 0.759
A_03560 Schistosoma haematobium A_03560 I 0.757
CLEC005479 Cimex lectularius CLEC005479 N 0.757
Smp_172460 Schistosoma mansoni Smp_172460 I 0.757
si:ch211-117k10.3 Oryzias latipes ENSORLG00000012237 I 0.756
ENSONIG00000003215 Oreochromis niloticus ENSONIG00000003215 I 0.756
ENSXMAG00000007908 Xiphophorus maculatus ENSXMAG00000007908 I 0.756
si:ch211-117k10.3 Takifugu rubripes ENSTRUG00000000076 I 0.756
si:ch211-117k10.3 Tetraodon nigroviridis ENSTNIG00000007382 I 0.756
ENSLACG00000013240 Latimeria chalumnae ENSLACG00000013240 I 0.756
KLF15 Gasterosteus aculeatus ENSGACG00000011317 I 0.756
Alligator_sinensis_CCG019865.1 Alligator sinensis Alligator_sinensis_CCG019865.1 I 0.756
Cmyd_10010595 Chelonia mydas Cmyd_10010595 I 0.756
Ogr18174 Ophisaurus gracilis Ogr18174 I 0.756
Pvit_06090 Pogona vitticeps Pvit_06090 I 0.756
ENSPFOG00000012815 Poecilia formosa ENSPFOG00000012815 I 0.756