CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SNAPOd2T00019413001
(
Oikopleura dioica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SNAPOd2T00019413001
T145307_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SNAPOd2T00019413001
C2H2 ZF
83
110
YFCFWNNCSRFGTPFKAKYKLVNHMRVH
SNAPOd2T00019413001
C2H2 ZF
116
138
FSCNDCGKIFARSENLKIHKRTH
SNAPOd2T00019413001
C2H2 ZF
144
168
FICPHPGCGRAFSNSSDRKKHQNVH
SNAPOd2T00019413001
C2H2 ZF
173
197
LMCPILGCDRSYSHPSSMRKHLKTH
Links
Other
C2H2 ZF
family TFs
Other
Oikopleura dioica
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSGMOG00000004419
Gadus morhua
ENSGMOG00000004419
I
0.767
ENSONIG00000002719
Oreochromis niloticus
ENSONIG00000002719
I
0.767
ENSPFOG00000012980
Poecilia formosa
ENSPFOG00000012980
I
0.767
TC010234
Tribolium castaneum
TC010234
I
0.758
TMUE_s0101002100
Trichuris muris
TMUE_s0101002100
I
0.758
SNAPOd2T00002718001
Oikopleura dioica
SNAPOd2T00002718001
I
0.757