CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
prdm9.L
(
Xenopus laevis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XB-GENE-5904911
T145487_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAB07010
C2H2 ZF
68
88
FDCRECGQSFRKKSKLKTHFL
AAB07010
C2H2 ZF
96
118
CVCVHCGKRFADKYKLSLHLRIH
AAB07010
C2H2 ZF
124
146
SVCPHCGKSYRDKTKLTVHLRIH
AAB07010
C2H2 ZF
152
174
FVCPECGKGFRDASFLKSHLSIH
AAB07010
C2H2 ZF
180
202
FVCTECGKSFRKKCELKSHLQVH
AAB07010
C2H2 ZF
208
230
FVCTECGKSFRDRSELNIHINVH
AAB07010
C2H2 ZF
235
257
FPCTECGKSFAAKKNLKRHQMIH
AAB07010
C2H2 ZF
263
285
HECTECGKQFLEKSKLKRHHLSH
AAB07010
C2H2 ZF
291
313
FSCFECGEQFTWKHLLQNHQLSH
AAB07010
C2H2 ZF
319
341
FVCSECGKSFKTKASLALHCHIH
AAB07010
C2H2 ZF
347
369
FVCPECGKGFRDPTSLNSHVRRH
AAB07010
C2H2 ZF
375
397
FACAECGKTYTDSSTLKNHLKLH
Links
Other
C2H2 ZF
family TFs
Other
Xenopus laevis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAB72012
Xenopus laevis
AAB72012
N
0.813