CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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znf250
(
Xenopus tropicalis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XB-GENE-6453461
T145570_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAH91620
C2H2 ZF
155
177
YFCHDCEKCFKHSSALEAHRRVH
AAH91620
C2H2 ZF
183
205
HQCDICKETFSYKSALIVHRRLH
AAH91620
C2H2 ZF
278
300
HKCNYCDKRFNDLSILEAHHRIH
AAH91620
C2H2 ZF
306
328
YPCTMCDQSFSKPSLLAAHNNTH
AAH91620
C2H2 ZF
334
356
YQCDQCDKNFNDQSLLVAHKRTH
AAH91620
C2H2 ZF
362
382
HKCSHCNKWFPNRTTLIAHEE
AAH91620
C2H2 ZF
390
412
YKCKHCEKSFNDKSLLVTHEGVH
AAH91620
C2H2 ZF
418
440
FKCNQCPESFFLKTQLMVHQATH
AAH91620
C2H2 ZF
446
468
FPCSQCERSFNKKETLLAHIRVH
Links
Other
C2H2 ZF
family TFs
Other
Xenopus tropicalis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
znf250.L
Xenopus laevis
XB-GENE-6255394
N
0.781