CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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prdm10
(
Xenopus tropicalis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XB-GENE-985864
T145714_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAI68013
C2H2 ZF
559
581
FKCLQCGKAFREKEKLDQHLRFH
AAI68013
C2H2 ZF
589
611
LTCDICNKGFISTSSLENHMKFH
AAI68013
C2H2 ZF
617
639
YSCIFCPESFDRLDLLKDHVVVH
AAI68013
C2H2 ZF
645
668
FSCPTCKKRFTDFIQVKKHVRSFH
AAI68013
C2H2 ZF
673
695
YQCTECDKAFCRPDKLRLHMLRH
AAI68013
C2H2 ZF
701
724
FLCSTCGKQFKRKDKLREHMQRMH
AAI68013
C2H2 ZF
756
779
FKCRVCMMGFRRRGMLVNHLSKRH
AAI68013
C2H2 ZF
801
824
YYCQYCEKVYKSASKRKAHILKNH
AAI68013
C2H2 ZF
863
886
VCCPHCSKQYSSKTKMVQHIRKKH
B4F6U4
C2H2 ZF
559
581
FKCLQCGKAFREKEKLDQHLRFH
B4F6U4
C2H2 ZF
589
611
LTCDICNKGFISTSSLENHMKFH
B4F6U4
C2H2 ZF
617
639
YSCIFCPESFDRLDLLKDHVVVH
B4F6U4
C2H2 ZF
645
668
FSCPTCKKRFTDFIQVKKHVRSFH
B4F6U4
C2H2 ZF
673
695
YQCTECDKAFCRPDKLRLHMLRH
B4F6U4
C2H2 ZF
701
724
FLCSTCGKQFKRKDKLREHMQRMH
B4F6U4
C2H2 ZF
756
779
FKCRVCMMGFRRRGMLVNHLSKRH
B4F6U4
C2H2 ZF
801
824
YYCQYCEKVYKSASKRKAHILKNH
B4F6U4
C2H2 ZF
863
886
VCCPHCSKQYSSKTKMVQHIRKKH
Links
Other
C2H2 ZF
family TFs
Other
Xenopus tropicalis
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRDM10
Anolis carolinensis
ENSACAG00000017654
N
0.779
PRDM10
Monodelphis domestica
ENSMODG00000004979
N
0.763