CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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XP_002937865
(
Xenopus tropicalis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XP_002937865
T145784_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002937865
C2H2 ZF
392
413
RCSVCGANLPDNDSVEHHRKLH
XP_002937865
C2H2 ZF
448
470
FVCEQCGAQFSKEDAYEAHRRTH
XP_002937865
C2H2 ZF
478
499
FCLLCGKRFQTQTALQQHMEVH
XP_002937865
C2H2 ZF
505
527
YICSECNRTFPSHTALKRHLRSH
XP_002937865
C2H2 ZF
533
555
YECEFCGSCFRDESTLKGHKRIH
XP_002937865
C2H2 ZF
561
583
YECNGCGKKFSLKHQLETHYRVH
XP_002937865
C2H2 ZF
589
611
FECKLCHQRSRDYSAMIKHLRTH
XP_002937865
C2H2 ZF
617
639
YQCTICLEYCPSLSAMQKHMKSH
Links
Other
C2H2 ZF
family TFs
Other
Xenopus tropicalis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSLOCG00000004636
Lepisosteus oculatus
ENSLOCG00000004636
N
0.772