CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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XP_002942031
(
Xenopus tropicalis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XP_002942031
T145835_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002942031
C2H2 ZF
612
634
HQCPHCKKGFVQKSDLIKHHRTH
XP_002942031
C2H2 ZF
640
662
YQCAECQKNFTERSALVNHQRTH
XP_002942031
C2H2 ZF
668
690
YRCPDCLKSFNQRSALTKHRRTH
XP_002942031
C2H2 ZF
696
718
YHCSVCAKSFIQNSDLVKHVRTH
XP_002942031
C2H2 ZF
724
746
YECPLCGKRFAESSALMKHKRTH
XP_002942031
C2H2 ZF
752
774
FRCSECSRSFAQNSDLAAHMRKH
XP_002942031
C2H2 ZF
806
828
FSCAKCRKTFKQWTSLLNHQQAH
XP_002942031
C2H2 ZF
834
856
YLCSYCNKGFVQNSDLVKHLRTH
XP_002942031
C2H2 ZF
862
884
YQCADCHKGFIQKSDLVKHLRTH
XP_002942031
C2H2 ZF
890
912
FKCTHCDKKFTEKSALAKHQRTH
XP_002942031
C2H2 ZF
918
940
YKCSTCEKAFTQRSNLILHQRIH
XP_002942031
C2H2 ZF
946
968
YKCTTCLRSFIQNSDLVKHQKVH
XP_002942031
C2H2 ZF
985
1007
YQCSECDRTFSHWSTFMKHSKLH
XP_002942031
C2H2 ZF
1012
1034
FQCMECKKGFVQKSDLVKHLRVH
XP_002942031
C2H2 ZF
1040
1062
FKCLVCKKSFSQKSDLHKHWRIH
XP_002942031
C2H2 ZF
1068
1090
FPCHTCDKSFTERSALIKHHRTH
XP_002942031
C2H2 ZF
1096
1118
HKCSVCEKGFIQKSALTKHMRSH
XP_002942031
C2H2 ZF
1124
1146
YACAQCGKSFIQNSDLVKHQRIH
XP_002942031
C2H2 ZF
1152
1174
YHCTECNKCFTEGSSLVKHRRTH
XP_002942031
C2H2 ZF
1180
1202
YPCTQCEKTFTQSSDLVKHTMVH
XP_002942031
C2H2 ZF
1234
1256
YPCPECDKVFCQRPALVKHQRTH
XP_002942031
C2H2 ZF
1262
1284
YPCNECDKSFFQTSDLVKHLRTH
XP_002942031
C2H2 ZF
1290
1312
YHCSECNKGFIQNSDLVKHQRTH
XP_002942031
C2H2 ZF
1318
1340
YTCAECNKGFVQRSALTKHMRTH
XP_002942031
C2H2 ZF
1346
1368
YKCEQCQKCFIQNSDLVKHQRIH
XP_002942031
C2H2 ZF
1374
1396
YHCPDCGKRFTEGSSLIKHQRIH
XP_002942031
C2H2 ZF
1402
1424
YPCNVCGKSFSQSCNLLKHLKCH
XP_002942031
C2H2 ZF
1473
1495
FKCNDCGKCFAHRSVLIKHIRIH
XP_002942031
C2H2 ZF
1501
1523
YKCTQCARSFIQKSDLVKHYRTH
XP_002942031
C2H2 ZF
1529
1551
YKCGLCERSFVEKSALSRHQRVH
XP_002942031
C2H2 ZF
1618
1640
YMCSECGKSFTHRSVFLKHWRSH
XP_002942031
C2H2 ZF
1646
1668
YTCKECGKGFSQSSALVKHVRIH
XP_002942031
C2H2 ZF
1674
1696
YACPTCGKSFIQNSDLAKHQRIH
XP_002942031
C2H2 ZF
1702
1724
YRCTTCGKKFIDRSSVVKHSRTH
XP_002942031
C2H2 ZF
1730
1752
YPCKECGKGFVQRSDLVKHTRTH
XP_002942031
C2H2 ZF
1758
1779
YACNGCERSFSTHSASVRHQRL
Links
Other
C2H2 ZF
family TFs
Other
Xenopus tropicalis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
znf208.L
Xenopus laevis
XB-GENE-6252152
N
0.758