CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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XP_002942037
(
Xenopus tropicalis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XP_002942037
T145836_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002942037
C2H2 ZF
162
184
CQCNVCGKSFMWLSALNIHKRIH
XP_002942037
C2H2 ZF
190
212
YQCSTCGRGFSQKTNLTRHQRNH
XP_002942037
C2H2 ZF
218
240
YGCTVCGRHFTQKQHLSKHTKTH
XP_002942037
C2H2 ZF
246
268
YQCTDCGKSFFNRQQLVKHRKIH
XP_002942037
C2H2 ZF
274
296
FSCKECGMSFPLKSNLKMHQKMH
XP_002942037
C2H2 ZF
357
379
FVCNECGKSFSWWSALLMHMRMH
XP_002942037
C2H2 ZF
385
407
YKCNMCGKGFRGCQSLTIHQRTH
XP_002942037
C2H2 ZF
413
435
YKCMQCGKSFSQRPNLVRHQRKH
XP_002942037
C2H2 ZF
441
463
YVCPHCGKGFTQKQHMTKHLHVH
XP_002942037
C2H2 ZF
469
491
HKCKECGAAFTDAVTLAQHRVVH
XP_002942037
C2H2 ZF
564
586
FHCDQCGKSFGWWSAFNIHQRRH
XP_002942037
C2H2 ZF
592
614
YACTECGKNFTWWSALIIHQRTH
XP_002942037
C2H2 ZF
620
642
FQCPSCGKCFSQKPNLVRHLRRH
XP_002942037
C2H2 ZF
648
668
YQCNECGKRFTQKQHLSKHHY
Links
Other
C2H2 ZF
family TFs
Other
Xenopus tropicalis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
znf569.L
Xenopus laevis
XB-GENE-6034006
N
0.794