CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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0800010292
(
Ostreococcus tauri
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
0800010292
T145910_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CEG01538.1
M01201_2.00
Ostreococcus tauri
YGATTGTT
AACAATCR
PBM
Lambert et al.(2019)
pTH9941
0.811
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
0800010292
C2H2 ZF
158
179
CGVCGKAFSTKQMQERHEDSAH
0800010292
C2H2 ZF
186
211
IPCPVDGCTVMFSNVGSISDHMKRAH
0800010292
C2H2 ZF
217
241
YACTYPGCSAKFATSSDKARHFRTH
Links
Other
C2H2 ZF
family TFs
Other
Ostreococcus tauri
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CEG01538.1
Ostreococcus tauri
CEG01538.1
D
0.811