3902_YDR043C (Saccharomyces paradoxus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 3902_YDR043C T145978_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NRG1
M01527_2.00 		Saccharomyces cerevisiae
NDWCCCYNN
NNRGGGWHN		 PBM
Zhu et al.(2009)
Nrg1 		0.827 1.000
NRG1
M08513_2.00 		Saccharomyces cerevisiae
RGACCCT
AGGGTCY		 Misc
DeBoer et al.(2011)
YDR043C_598 		0.827 1.000
NRG1
M08514_2.00 		Saccharomyces cerevisiae
TGTGCCT
AGGCACA		 Misc
DeBoer et al.(2011)
YDR043C_904 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
3902_YDR043C C2H2 ZF 174 196

Links

Other C2H2 ZF family TFs
Other Saccharomyces paradoxus TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SKUD_172201 Saccharomyces kudriavzevii SKUD_172201 I 0.827
NRG1 Saccharomyces cerevisiae YDR043C D 0.827
21303_YDR043C Saccharomyces bayanus 21303_YDR043C I 0.827
3542_YDR043C Saccharomyces mikatae 3542_YDR043C I 0.827
SU7_0601 Saccharomyces arboricola SU7_0601 I 0.815
NCAS_0A10650 Naumovozyma castellii NCAS_0A10650 I 0.813
Scas_Contig569.2 Saccharomyces castellii Scas_Contig569.2 I 0.813
NDAI_0A05650 Naumovozyma dairenensis NDAI_0A05650 I 0.765