CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_kg.C_20040
(
Cryphonectria parasitica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh1_kg.C_20040
T146139_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_kg.C_20040
C2H2 ZF
23
46
YECTYCGNRFKNKNEAERHQNSLH
estExt_fgenesh1_kg.C_20040
C2H2 ZF
75
88
DTCGYCGEEFIRTG
Links
Other
C2H2 ZF
family TFs
Other
Cryphonectria parasitica
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CGGC5_10190
Colletotrichum gloeosporioides
CGGC5_10190
N
0.786
CH063_09002
Colletotrichum higginsianum
CH063_09002
N
0.786
GLRG_08195
Colletotrichum graminicola
GLRG_08195
N
0.786
ACRE_085340
Acremonium chrysogenum
ACRE_085340
N
0.767
VDAG_03771
Verticillium dahliae
VDAG_03771
N
0.762