CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_kg.C_70648
(
Phytophthora capsici
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh1_kg.C_70648
T146143_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_kg.C_70648
C2H2 ZF
16
40
FRCSVPYCERSFGDSFSLAEHLKKH
estExt_fgenesh1_kg.C_70648
C2H2 ZF
46
70
HICPVRTCGRRFSTPGNLSRHKRLH
estExt_fgenesh1_kg.C_70648
C2H2 ZF
76
100
LECPVAGCICTFRSENKLSKHMKFH
estExt_fgenesh1_kg.C_70648
C2H2 ZF
106
131
HVCSSPGCGKTFSTAGNLNRHIKGHH
Links
Other
C2H2 ZF
family TFs
Other
Phytophthora capsici
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_09526
Phytophthora parasitica
F443_09526
N
0.827
Physo137938
Phytophthora sojae
Physo137938
N
0.825
PITG_01388
Phytophthora infestans
PITG_01388
N
0.820
Phyra76487
Phytophthora ramorum
Phyra76487
N
0.765
fgenesh_scip_prom.28083.4533
Phytophthora lateralis
fgenesh_scip_prom.28083.4533
N
0.765