CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgeneshTM_pm.8_#_130
(
Tremella mesenterica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgeneshTM_pm.8_#_130
T146271_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CNG02160
M01861_2.00
Cryptococcus neoformans
NKTGCRCRNNN
NNNYGYGCAMN
PBM
Weirauch et al.(2014)
pTH8370
0.787
0.837
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgeneshTM_pm.8_#_130
C2H2 ZF
43
67
FVCKFEGCNKAFARKSDLARHFRIH
fgeneshTM_pm.8_#_130
C2H2 ZF
73
97
FVCTYRGCNKSFIQRSALTVHTRVH
fgeneshTM_pm.8_#_130
C2H2 ZF
103
125
HICEKCDKAFADSSSLARHRRIH
fgeneshTM_pm.8_#_130
C2H2 ZF
131
156
YGCKVAGCGKNFARRNTYLKHYKRSH
Links
Other
C2H2 ZF
family TFs
Other
Tremella mesenterica
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CNG02160
Cryptococcus neoformans
CNG02160
D
0.787
L804_03653
Cryptococcus gattii
L804_03653
I
0.787