CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Minc05885
(
Meloidogyne incognita
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Minc05885
T146419_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc05885
C2H2 ZF
333
355
FICRYCGRQFTKSYNLLIHERIH
Minc05885
C2H2 ZF
361
383
FPCDECSKSFRRQDHLRDHKFTH
Minc05885
C2H2 ZF
389
412
FKCSECSRGFCQQRTLLIHRQRDH
Links
Other
C2H2 ZF
family TFs
Other
Meloidogyne incognita
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Minc03597
Meloidogyne incognita
Minc03597
N
0.827
maker-nMf.1.1.scaf13027-augustus-gene-0.3
Meloidogyne floridensis
maker-nMf.1.1.scaf13027-augustus-gene-0.3
N
0.827