CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ALUE_0001243401
(
Ascaris lumbricoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
ALUE_0001243401
T151956_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ALUE_0001243401-mRNA-1
C2H2 ZF
188
209
YQCERCGKVFTYAYYREKHLKY
ALUE_0001243401-mRNA-1
C2H2 ZF
220
243
FRCVLCPRSFEKRDRLRIHVLHVH
ALUE_0001243401-mRNA-1
C2H2 ZF
249
271
HVCSVCGKSFSQSSSLNKHLRVH
ALUE_0001243401-mRNA-1
C2H2 ZF
277
299
YKCPYCSKSFTASSILRTHIRQH
ALUE_0001243401-mRNA-1
C2H2 ZF
305
328
FQCSMCGKSFASHAAHDSHVRRTH
ALUE_0001243401-mRNA-1
C2H2 ZF
336
357
FKCAICEKAFEHKSHLNFHQQC
Links
Other
C2H2 ZF
family TFs
Other
Ascaris lumbricoides
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASU_07070
Ascaris suum
ASU_07070
N
0.827
L596_g10504
Steinernema carpocapsae
L596_g10504
N
0.772
L889_g14628
Steinernema feltiae
L889_g14628
N
0.766
L893_g28165
Steinernema glaseri
L893_g28165
N
0.764
RSKR_0000934700
Rhabditophanes kr3021
RSKR_0000934700
N
0.758