CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ANCDUO_06400
(
Ancylostoma duodenale
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
ANCDUO_06400
T152157_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ztf-2
M01866_2.00
Caenorhabditis elegans
NYWGRAMCHN
NDGKTYCWRN
PBM
Weirauch et al.(2014)
pTH9049
0.797
0.956
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ANCDUO_06400
C2H2 ZF
11
32
TCSTCGYVGKWISEMIRHKRVH
ANCDUO_06400
C2H2 ZF
38
61
FKCRYCSRTSKWKADLIRHVAKTH
Links
Other
C2H2 ZF
family TFs
Other
Ancylostoma duodenale
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HPLM_0001047401
Haemonchus placei
HPLM_0001047401
I
0.818
NBR_0000225801
Nippostrongylus brasiliensis
NBR_0000225801
I
0.818
TELCIR_15257
Teladorsagia circumcincta
TELCIR_15257
I
0.818
ztf-2
Caenorhabditis elegans
WBGene00008762
D
0.797
snap_masked-nMf.1.1.scaf00860-processed-gene-0.9
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf00860-processed-gene-0.9
I
0.762