CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ASU_03809
(
Ascaris suum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
ASU_03809
T152295_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
syd-9
M00646_2.00
Caenorhabditis elegans
DACHGTAH
DTACDGTH
PBM
Narasimhan et al.(2015)
pTH10717
0.772
0.882
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ASU_03809
C2H2 ZF
47
69
NCNLCPKSFPNQKLLQQHQHMFH
ASU_03809
C2H2 ZF
74
96
FICEICGKAFRFRSNLAEHRSVH
ASU_03809
C2H2 ZF
102
125
YVCKFCGKSSRLKGNLTKHILKHH
Links
Other
C2H2 ZF
family TFs
Other
Ascaris suum
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LOAG_18886
Loa loa
LOAG_18886
I
0.810
Bm7577
Brugia malayi
Bm7577
I
0.810
syd-9
Caenorhabditis elegans
WBGene00044068
D
0.772
CJA12292
Caenorhabditis japonica
CJA12292
I
0.772
CBN06490
Caenorhabditis brenneri
CBN06490
I
0.772
ALUE_0000835901
Ascaris lumbricoides
ALUE_0000835901
N
0.681