CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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D917_02831
(
Trichinella nativa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
D917_02831
T152847_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
D917_02831
C2H2 ZF
149
171
HRCIYCGKLYSRKYGLKIHLRTH
D917_02831
C2H2 ZF
177
199
LQCKICNRAFGDPSNLNKHTRLH
D917_02831
C2H2 ZF
209
232
LQCTVCGKLLVRKRDLDRHIASRH
Links
Other
C2H2 ZF
family TFs
Other
Trichinella nativa
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TTRE_0000191201
Trichuris trichiura
TTRE_0000191201
N
0.788
TMUE_s0005011900
Trichuris muris
TMUE_s0005011900
N
0.781
EFV59777
Trichinella spiralis
EFV59777
N
0.768
D917_09026
Trichinella nativa
D917_09026
N
0.768
D918_09720
Trichuris suis
D918_09720
N
0.767
TMUE_s0001001400
Trichuris muris
TMUE_s0001001400
N
0.767
TTRE_0000285701
Trichuris trichiura
TTRE_0000285701
N
0.767
nRc.2.0.1.g23590
Romanomermis culicivorax
nRc.2.0.1.g23590
N
0.759
SBAD_0001206001
Soboliphyme baturini
SBAD_0001206001
N
0.758