D917_09327 (Trichinella nativa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 D917_09327 T152907_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KLF1
M00226_2.00 		Homo sapiens
CMCGCCCM
KGGGCGKG		 PBM
Barrera et al.(2016)
KLF1_REF 		0.757 0.768
KLF1
M08293_2.00 		Homo sapiens
NVNNNRCCMCRCCCH
DGGGYGKGGYNNNBN		 ChIP-seq
Schmitges et al.(2016)
Q13351.MEME 		0.757 0.768
KLF1
M08871_2.00 		Homo sapiens
SVNDGCCMCRCCCH
DGGGYGKGGCHNBS		 Misc
Kulakovskiy et al.(2013)
KLF1_HUMAN.H11MO.0.A 		0.757 0.768
KLF1
M10163_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EKLF_Q5_01 		0.757 0.768
KLF1
M10164_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EKLF_Q5 		0.757 0.768
Klf1
M08099_2.00 		Mus musculus
NRCCACACCCW
WGGGTGTGGYN		 ChIP-seq
Mathelier et al.(2014)
MA0493.1 		0.757 0.754
Klf1
M09008_2.00 		Mus musculus
MVMNSCCMCRCCCH
DGGGYGKGGSNKBK		 Misc
Kulakovskiy et al.(2013)
KLF1_MOUSE.H11MO.0.A 		0.757 0.754
Klf1
M09516_2.00 		Mus musculus
DRCCACACCCWN
NWGGGTGTGGYH		 Misc
Heinz et al.(2010)
Erythrocyte-Klf1_GSE20478 		0.757 0.754
KLF1
M00224_2.00 		Homo sapiens
YMCGCCCH
DGGGCGKR		 PBM
Barrera et al.(2016)
KLF1_H299Y 		0.757 0.754
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
D917_09327 C2H2 ZF 19 50
D917_09327 C2H2 ZF 56 80
D917_09327 C2H2 ZF 86 108

Links

Other C2H2 ZF family TFs
Other Trichinella nativa TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
EFV52159 Trichinella spiralis EFV52159 I 0.827
D917_04179 Trichinella nativa D917_04179 I 0.827
D918_01816 Trichuris suis D918_01816 I 0.780
TTRE_0000268201 Trichuris trichiura TTRE_0000268201 I 0.780
csin105473 Clonorchis sinensis csin105473 I 0.770
T265_06412 Opisthorchis viverrini T265_06412 I 0.770
CLEC010043 Cimex lectularius CLEC010043 I 0.766
ECPE_0000408701 Echinostoma caproni ECPE_0000408701 I 0.764
CGI_10024574 Crassostrea gigas CGI_10024574 I 0.761
ENSAMEG00000012407 Ailuropoda melanoleuca ENSAMEG00000012407 I 0.761
KLF1 Bos taurus ENSBTAG00000006083 I 0.761
KLF1 Canis familiaris ENSCAFG00000017111 I 0.761
KLF1 Felis catus ENSFCAG00000026066 I 0.761
KLF1 Myotis lucifugus ENSMLUG00000012751 I 0.761
KLF1 Monodelphis domestica ENSMODG00000011491 I 0.761
ENSMPUG00000004544 Mustela putorius furo ENSMPUG00000004544 I 0.761
KLF1 Otolemur garnettii ENSOGAG00000025438 I 0.761
ENSSHAG00000015288 Sarcophilus harrisii ENSSHAG00000015288 I 0.761
KLF1 Sus scrofa ENSSSCG00000013730 I 0.761
Ppa-klf-1 Pristionchus pacificus PPA04120 I 0.761
ENSBTAP00000043340-D1 Bos grunniens ENSBTAP00000043340-D1 I 0.761
HHAL010738-PA Halyomorpha halys HHAL010738-PA I 0.761
tetur11g05790 Tetranychus urticae tetur11g05790 I 0.759
fgenesh2_pg.scaffold_114000041 Branchiostoma floridae fgenesh2_pg.scaffold_114000041 I 0.758
KLF1 Callithrix jacchus ENSCJAG00000004762 I 0.757
KLF1 Cavia porcellus ENSCPOG00000000784 I 0.757
ENSCSAG00000006545 Chlorocebus sabaeus ENSCSAG00000006545 I 0.757
klf3 Danio rerio ENSDARG00000015495 I 0.757
KLF1 Homo sapiens ENSG00000105610 D 0.757
KLF1 Gorilla gorilla ENSGGOG00000003408 I 0.757
KLF1 Loxodonta africana ENSLAFG00000016145 I 0.757
KLF1 Microcebus murinus ENSMICG00000016260 I 0.757
KLF1 Macaca mulatta ENSMMUG00000011230 I 0.757
KLF8 Monodelphis domestica ENSMODG00000010883 I 0.757
Klf1 Mus musculus ENSMUSG00000054191 D 0.757
ENSNLEG00000012868 Nomascus leucogenys ENSNLEG00000012868 I 0.757
KLF1 Oryctolagus cuniculus ENSOCUG00000011998 I 0.757
ENSONIG00000008968 Oreochromis niloticus ENSONIG00000008968 I 0.757
KLF1 Ochotona princeps ENSOPRG00000004951 I 0.757
KLF1 Procavia capensis ENSPCAG00000015589 I 0.757
ENSPPYG00000009612 Pongo abelii ENSPPYG00000009612 I 0.757
KLF1 Pan troglodytes ENSPTRG00000010547 I 0.757
Klf1 Rattus norvegicus ENSRNOG00000003443 I 0.757
ENSSHAG00000002694 Sarcophilus harrisii ENSSHAG00000002694 I 0.757
ENSSTOG00000021956 Ictidomys tridecemlineatus ENSSTOG00000021956 I 0.757
KLF1 Tupaia belangeri ENSTBEG00000013433 I 0.757
ENSMMUP00000014716 Macaca fascicularis ENSMMUP00000014716 I 0.757