CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPLIN_001293700
(
Globodera pallida
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
GPLIN_001293700
T153612_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPLIN_001293700
C2H2 ZF
216
239
FKCKYCNRTSKWKADLIRHVAKTH
Links
Other
C2H2 ZF
family TFs
Other
Globodera pallida
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
augustus_masked-nMf.1.1.scaf11664-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf11664-processed-gene-0.0
N
0.827