CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HCOI00235700
(
Haemonchus contortus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
HCOI00235700
T153793_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HCOI00235700.t1
C2H2 ZF
339
361
LVCPICGFSCNSKFHYNSHMNTH
HCOI00235700.t1
C2H2 ZF
364
387
HQCSMCDYTSRTEGRLKKHMRESH
HCOI00235700.t1
C2H2 ZF
545
567
YKCKQCPHISFSKDDQWAHARTH
HCOI00235700.t1
C2H2 ZF
574
596
MNCPTCNFVTEYKHHLEYHIRNH
HCOI00235700.t1
C2H2 ZF
602
624
FQCKKCSYTCVNKSMLNSHMKSH
HCOI00235700.t1
C2H2 ZF
630
654
FRCMDCTYATKYCHSLKLHLKKYDH
HCOI00235700.t2
C2H2 ZF
339
361
LVCPICGFSCNSKFHYNSHMNTH
HCOI00235700.t2
C2H2 ZF
364
387
HQCSMCDYTSRTEGRLKKHMRESH
HCOI00235700.t2
C2H2 ZF
545
567
YKCKQCPHISFSKDDQWAHARTH
HCOI00235700.t2
C2H2 ZF
574
596
MNCPTCNFVTEYKHHLEYHIRNH
HCOI00235700.t2
C2H2 ZF
602
624
FQCKKCSYTCVNKSMLNSHMKSH
HCOI00235700.t2
C2H2 ZF
630
654
FRCMDCTYATKYCHSLKLHLKKYDH
Links
Other
C2H2 ZF
family TFs
Other
Haemonchus contortus
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACOC_0001199001
Angiostrongylus costaricensis
ACOC_0001199001
N
0.827
ANCCAN_12719
Ancylostoma caninum
ANCCAN_12719
N
0.827
ANCDUO_08768
Ancylostoma duodenale
ANCDUO_08768
N
0.827
DICVIV_04954
Dictyocaulus viviparus
DICVIV_04954
N
0.821