CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HCOI01645600
(
Haemonchus contortus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
HCOI01645600
T153857_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HCOI01645600.t1
C2H2 ZF
444
467
FKCPYCDHRSKEKSGLEKHIRCIH
HCOI01645600.t1
C2H2 ZF
473
495
YKCKYCNQSFKVQSNLVRHIRAH
HCOI01645600.t1
C2H2 ZF
501
524
YACKKCGISYADKKNVDAHVFREH
HCOI01645600.t2
C2H2 ZF
415
438
FKCPYCDHRSKEKSGLEKHIRCIH
HCOI01645600.t2
C2H2 ZF
444
466
YKCKYCNQSFKVQSNLVRHIRAH
HCOI01645600.t2
C2H2 ZF
472
495
YACKKCGISYADKKNVDAHVFREH
Links
Other
C2H2 ZF
family TFs
Other
Haemonchus contortus
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TELCIR_13454
Teladorsagia circumcincta
TELCIR_13454
N
0.827
TELCIR_11543
Teladorsagia circumcincta
TELCIR_11543
N
0.827
CGOC_0000660401
Cylicostephanus goldi
CGOC_0000660401
N
0.820
DICVIV_09836
Dictyocaulus viviparus
DICVIV_09836
N
0.804