CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HNAJ_0000250001
(
Hymenolepis nana
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
HNAJ_0000250001
T154103_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HNAJ_0000250001-mRNA-1
C2H2 ZF
155
177
LKCEICGKKCSRVSAFKSHLSLH
HNAJ_0000250001-mRNA-1
C2H2 ZF
213
236
YRCKLCGTVNSSLTQLRIHYKRNH
HNAJ_0000250001-mRNA-1
C2H2 ZF
342
364
FCCPHCSKRFTQKSAMETHMKIH
HNAJ_0000250001-mRNA-1
C2H2 ZF
370
393
CTCPYCEKSFNFKQNLDFHVAKYH
HNAJ_0000250001-mRNA-1
C2H2 ZF
945
967
HVCTICSYRFQRSSDLHRHMLLH
HNAJ_0000250001-mRNA-1
C2H2 ZF
973
996
YACKFCDKRFILPRRLLAHATNHH
HNAJ_0000250001-mRNA-1
C2H2 ZF
1027
1049
LNCHLCGTKLSNAASLHAHMRIH
HNAJ_0000250001-mRNA-1
C2H2 ZF
1055
1076
YACPYCNECFRTPIQRKRHLKV
HNAJ_0000250001-mRNA-1
C2H2 ZF
1148
1172
WQCRNCQETFNSNKAFTSHQCVILH
HNAJ_0000250001-mRNA-1
C2H2 ZF
1189
1211
FTCSVCKHQFTRRNDLKRHEQTH
HNAJ_0000250001-mRNA-1
C2H2 ZF
1221
1245
FCCGVCGARFTQSGSLNIHLQATGH
HNAJ_0000250001-mRNA-1
C2H2 ZF
1255
1278
FRCRLCRSSFFYRSGLIRHSAIAH
Links
Other
C2H2 ZF
family TFs
Other
Hymenolepis nana
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HDID_0000032101
Hymenolepis diminuta
HDID_0000032101
N
0.765