CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HPBE_0001519601
(
Heligmosomoides bakeri
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
HPBE_0001519601
T154214_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPBE_0001519601-mRNA-1
C2H2 ZF
24
44
KECGMMFATSSQVAAHVSQHH
HPBE_0001519601-mRNA-1
C2H2 ZF
53
80
HVCLWRNCDRIGKPFKAKYKLVNHIRVH
HPBE_0001519601-mRNA-1
C2H2 ZF
86
108
FRCEQCNREFARSENLKIHVRTH
HPBE_0001519601-mRNA-1
C2H2 ZF
114
138
FPCPHLGCDKTFANSSDRKKHMHVH
HPBE_0001519601-mRNA-1
C2H2 ZF
144
168
YECKMKGCKKVYSHPSSLRKHMKAH
Links
Other
C2H2 ZF
family TFs
Other
Heligmosomoides bakeri
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_13803
Ancylostoma caninum
ANCCAN_13803
N
0.814
DICVIV_06797
Dictyocaulus viviparus
DICVIV_06797
N
0.814
NECAME_00647
Necator americanus
NECAME_00647
N
0.814
OESDEN_01132
Oesophagostomum dentatum
OESDEN_01132
N
0.814
HCOI00478000
Haemonchus contortus
HCOI00478000
N
0.807
SVUK_0001383501
Strongylus vulgaris
SVUK_0001383501
N
0.804
HCOI01782100
Haemonchus contortus
HCOI01782100
N
0.761