CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HPBE_0002274901
(
Heligmosomoides bakeri
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
HPBE_0002274901
T154224_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPBE_0002274901-mRNA-1
C2H2 ZF
223
246
TDCDECGKRFASAFQLREHISIQH
HPBE_0002274901-mRNA-1
C2H2 ZF
252
275
FVCEECGQKFGRRGGLRRHVQMVH
HPBE_0002274901-mRNA-1
C2H2 ZF
312
334
YVCETCGKAFVRRNDLKMHTLTH
HPBE_0002274901-mRNA-1
C2H2 ZF
341
360
HCECGSKFRRLIYLKKHQRM
Links
Other
C2H2 ZF
family TFs
Other
Heligmosomoides bakeri
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NBR_0000745801
Nippostrongylus brasiliensis
NBR_0000745801
N
0.819
HCOI00173500
Haemonchus contortus
HCOI00173500
N
0.805
Hba_14735
Heterorhabditis bacteriophora
Hba_14735
N
0.790