CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nAv.1.0.1.g00195
(
Acanthocheilonema viteae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
nAv.1.0.1.g00195
T155000_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nAv.1.0.1.t00195-RA
C2H2 ZF
614
636
FRCTLCGYKSRSRNHLIGHIRNH
nAv.1.0.1.t00195-RA
C2H2 ZF
642
664
FHCSECGRAFAMKSTLDQHVAAH
nAv.1.0.1.t00195-RA
C2H2 ZF
670
692
YQCPHCDFSTKYQSHLISHRRIH
nAv.1.0.1.t00195-RA
C2H2 ZF
697
721
FHCHYDECTYSSPKKSQLAAHLRTH
nAv.1.0.1.t00195-RA
C2H2 ZF
727
749
HHCKTCNRSFIEKSHLVRHERIH
nAv.1.0.1.t00195-RA
C2H2 ZF
755
778
FKCDNCDYSSSRRDKLKEHIQKHH
Links
Other
C2H2 ZF
family TFs
Other
Acanthocheilonema viteae
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LOAG_02592
Loa loa
LOAG_02592
N
0.817
nLs.2.1.2.g05892
Litomosoides sigmodontis
nLs.2.1.2.g05892
N
0.814
BTMF_0000413001
Brugia timori
BTMF_0000413001
N
0.809
nDi.2.2.2.g01103
Dirofilaria immitis
nDi.2.2.2.g01103
N
0.794