CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nAv.1.0.1.g02289
(
Acanthocheilonema viteae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
nAv.1.0.1.g02289
T155009_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nAv.1.0.1.t02289-RA
C2H2 ZF
49
71
CACKDCGKLFNSVWYLKQHAVKH
nAv.1.0.1.t02289-RA
C2H2 ZF
77
97
FRCKFCYKTYKFRSNLYQHKC
nAv.1.0.1.t02289-RA
C2H2 ZF
214
236
YQCRKCKLQFPTRGYLTRHIAQH
nAv.1.0.1.t02289-RA
C2H2 ZF
244
266
MQCELCPQRFSLDTELRKHAELH
Links
Other
C2H2 ZF
family TFs
Other
Acanthocheilonema viteae
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nOo.2.0.1.g05896
Onchocerca ochengi
nOo.2.0.1.g05896
N
0.756
WBGene00239993
Onchocerca volvulus
WBGene00239993
N
0.756