CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nAv.1.0.1.g05333
(
Acanthocheilonema viteae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
nAv.1.0.1.g05333
T155023_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nAv.1.0.1.t05333-RA
C2H2 ZF
37
61
LKCLWSSCFMVYDTLNDLLQHMRSH
nAv.1.0.1.t05333-RA
C2H2 ZF
76
100
IVCPINGCSKTLATEHHLYRHLYMH
nAv.1.0.1.t05333-RA
C2H2 ZF
180
204
LSCGWQGCKMHFKNKANLRVHCRHH
nAv.1.0.1.t05333-RA
C2H2 ZF
211
231
ACPYCGVFFANNSKLIDHMLR
nAv.1.0.1.t05333-RA
C2H2 ZF
249
271
YSCHLCQKQFGTQRLLREHCRRH
nAv.1.0.1.t05333-RA
C2H2 ZF
275
298
HKCKYCTVTVDSPSALKRHVAAVH
nAv.1.0.1.t05333-RA
C2H2 ZF
304
326
YTCCYCGHSFSQKADVDRHMVVH
nAv.1.0.1.t05333-RA
C2H2 ZF
332
354
HKCGHCGEQFRWKKQLTAHIRKH
nAv.1.0.1.t05333-RA
C2H2 ZF
363
386
HLCHLCDAKYANGFGLSRHLIRKH
Links
Other
C2H2 ZF
family TFs
Other
Acanthocheilonema viteae
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EEL_0000083701
Elaeophora elaphi
EEL_0000083701
N
0.826
Bm3927
Brugia malayi
Bm3927
N
0.820
LOAG_06195
Loa loa
LOAG_06195
N
0.811
nDi.2.2.2.g08806
Dirofilaria immitis
nDi.2.2.2.g08806
N
0.791
nOo.2.0.1.g03157
Onchocerca ochengi
nOo.2.0.1.g03157
N
0.787
WBGene00242824
Onchocerca volvulus
WBGene00242824
N
0.787