CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nAv.1.0.1.g08719
(
Acanthocheilonema viteae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
nAv.1.0.1.g08719
T155048_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nAv.1.0.1.t08719-RA
C2H2 ZF
128
151
YKCDVCGKEYNKEHNLKLHRLGQH
nAv.1.0.1.t08719-RA
C2H2 ZF
161
183
YICSFCPKKYARLAAYYAHLQIH
nAv.1.0.1.t08719-RA
C2H2 ZF
189
212
LICTFCKEEFDFQALLNKHLRLQH
nAv.1.0.1.t08719-RA
C2H2 ZF
269
291
HKCEACGKTFKKKFELMRHYVVH
nAv.1.0.1.t08719-RA
C2H2 ZF
297
319
FVCEICGKRFSQKASLGQHTLTH
nAv.1.0.1.t08719-RA
C2H2 ZF
327
350
HKCSLCDATFSQAGNLRRHVKLLH
nAv.1.0.1.t08719-RA
C2H2 ZF
360
383
FRCLKCTCVFTSLQPLQVHARKRH
nAv.1.0.1.t08719-RA
C2H2 ZF
411
433
FCCCVCGKIFGKTSDLVRHYRIH
nAv.1.0.1.t08719-RA
C2H2 ZF
439
461
FSCNRCGRDFNLKSSLKLHMDSH
nAv.1.0.1.t08719-RA
C2H2 ZF
471
496
YTCARCPVCMKQLASTPSLRRHLKIH
nAv.1.0.1.t08719-RA
C2H2 ZF
557
579
YKCRTCTASFSTLRRLKEHINRH
nAv.1.0.1.t08719-RA
C2H2 ZF
585
607
HICRLCYKSFYSLAQLKYHSEIH
nAv.1.0.1.t08719-RA
C2H2 ZF
613
635
FKCLTCDQTFRRRSQLKAHTSKH
nAv.1.0.1.t08719-RA
C2H2 ZF
720
741
TRCPVCFFSFSSDATLSTHLYN
nAv.1.0.1.t08719-RA
C2H2 ZF
753
776
LACNHCSKTFSGCVSLADHLQAFH
nAv.1.0.1.t08719-RA
C2H2 ZF
801
823
HVCDVCDRRFKKPSDLVRHKRIH
nAv.1.0.1.t08719-RA
C2H2 ZF
829
851
FSCGICDRSFRVKSTLYQHLKIH
nAv.1.0.1.t08719-RA
C2H2 ZF
860
882
MCSLCKRCYCSLSALRQHLYLAH
nAv.1.0.1.t08719-RA
C2H2 ZF
888
913
FKCTDETCNERFKTARSRDAHVRQFH
Links
Other
C2H2 ZF
family TFs
Other
Acanthocheilonema viteae
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nDi.2.2.2.g07387
Dirofilaria immitis
nDi.2.2.2.g07387
N
0.789
nOo.2.0.1.g01475
Onchocerca ochengi
nOo.2.0.1.g01475
N
0.778