CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nLs.2.1.2.g01760
(
Litomosoides sigmodontis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
nLs.2.1.2.g01760
T155319_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nLs.2.1.2.t01760-RA
C2H2 ZF
308
333
LRCEWQGCKRKFSSQKVLVDHVFTAH
nLs.2.1.2.t01760-RA
C2H2 ZF
340
366
YTCLWEGCKREEAFKAQYMLVVHVRRH
nLs.2.1.2.t01760-RA
C2H2 ZF
373
396
VCTYPGCDKSYSRLENLKTHVRTH
nLs.2.1.2.t01760-RA
C2H2 ZF
402
427
YRCEFPECGKAFSNASDRAKHQNRTH
nLs.2.1.2.t01760-RA
C2H2 ZF
433
458
YQCMINDCIKSYTDPSSLRKHIKSVH
Links
Other
C2H2 ZF
family TFs
Other
Litomosoides sigmodontis
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LOAG_03685
Loa loa
LOAG_03685
N
0.827
nAv.1.0.1.g09098
Acanthocheilonema viteae
nAv.1.0.1.g09098
N
0.827
BTMF_0001113801
Brugia timori
BTMF_0001113801
N
0.824
WUBG_09806
Wuchereria bancrofti
WUBG_09806
N
0.822
EEL_0000175301
Elaeophora elaphi
EEL_0000175301
N
0.817
nDi.2.2.2.g08086
Dirofilaria immitis
nDi.2.2.2.g08086
N
0.817
WBGene00244576
Onchocerca volvulus
WBGene00244576
N
0.769
nOo.2.0.1.g04169
Onchocerca ochengi
nOo.2.0.1.g04169
N
0.769