CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nLs.2.1.2.g01879
(
Litomosoides sigmodontis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
nLs.2.1.2.g01879
T155320_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nLs.2.1.2.t01879-RA
C2H2 ZF
10
32
HECQQCGKRFKARGGLQQHLRIH
nLs.2.1.2.t01879-RA
C2H2 ZF
38
60
YQCRFCPKRFTQKSHVDQHERIH
nLs.2.1.2.t01879-RA
C2H2 ZF
66
88
FSCQFCGRAFRQRSQQLGHESTH
Links
Other
C2H2 ZF
family TFs
Other
Litomosoides sigmodontis
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
WUBG_01611
Wuchereria bancrofti
WUBG_01611
N
0.827
Bm9460
Brugia malayi
Bm9460
N
0.827
LOAG_02659
Loa loa
LOAG_02659
N
0.827
WBGene00237415
Onchocerca volvulus
WBGene00237415
N
0.827
BTMF_0001424501
Brugia timori
BTMF_0001424501
N
0.827
EEL_0000426401
Elaeophora elaphi
EEL_0000426401
N
0.827
nOo.2.0.1.g02403
Onchocerca ochengi
nOo.2.0.1.g02403
N
0.827
TCLT_0000829601
Thelazia callipaeda
TCLT_0000829601
N
0.823
DME_0000232601
Dracunculus medinensis
DME_0000232601
N
0.817
ALUE_0001548501
Ascaris lumbricoides
ALUE_0001548501
N
0.804
ASU_00461
Ascaris suum
ASU_00461
N
0.804
TCNE_0000991701
Toxocara canis
TCNE_0000991701
N
0.804
ASIM_0000060601
Anisakis simplex
ASIM_0000060601
N
0.800
SMUV_0000886501
Syphacia muris
SMUV_0000886501
N
0.784
ACOC_0000564101
Angiostrongylus costaricensis
ACOC_0000564101
N
0.782
DICVIV_06569
Dictyocaulus viviparus
DICVIV_06569
N
0.782
Minc07456
Meloidogyne incognita
Minc07456
N
0.774
GPLIN_001283200
Globodera pallida
GPLIN_001283200
N
0.767
CRE14185
Caenorhabditis remanei
CRE14185
N
0.764