CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nOo.2.0.1.g04422
(
Onchocerca ochengi
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
nOo.2.0.1.g04422
T155393_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nOo.2.0.1.t04422-RA
C2H2 ZF
222
245
FVCFACGRVFDDEITMRDHVNEIH
nOo.2.0.1.t04422-RA
C2H2 ZF
253
275
FKCRHCYRRFKLKHHLQRHEHTH
nOo.2.0.1.t04422-RA
C2H2 ZF
281
304
HICNRCSSSFRNFESLVAHKSRAH
nOo.2.0.1.t04422-RA
C2H2 ZF
318
338
YNCNKCKQKFGTFIELSRHKY
nOo.2.0.1.t04422-RA
C2H2 ZF
375
398
KTCRICDKKFASRQSLIRHMGRIH
nOo.2.0.1.t04422-RA
C2H2 ZF
419
441
FACNVCSKRFTTRTLMLVHRKRH
nOo.2.0.1.t04422-RA
C2H2 ZF
446
469
FICQLCEKTYPLASELRKHIKRVH
Links
Other
C2H2 ZF
family TFs
Other
Onchocerca ochengi
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
WBGene00248425
Onchocerca volvulus
WBGene00248425
N
0.827
Bm10450
Brugia malayi
Bm10450
N
0.784
BTMF_0001123301
Brugia timori
BTMF_0001123301
N
0.784
nDi.2.2.2.g06497
Dirofilaria immitis
nDi.2.2.2.g06497
N
0.784
WUBG_07647
Wuchereria bancrofti
WUBG_07647
N
0.782
nLs.2.1.2.g02589
Litomosoides sigmodontis
nLs.2.1.2.g02589
N
0.769