CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PXEA_0000023701
(
Protopolystoma xenopodis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
PXEA_0000023701
T155774_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PXEA_0000023701-mRNA-1
C2H2 ZF
160
183
FSCRQCGHTYRQKVHLRKHVMSAH
PXEA_0000023701-mRNA-1
C2H2 ZF
189
211
YQCQHCAYATVEKSHLTVHVRTH
PXEA_0000023701-mRNA-1
C2H2 ZF
217
240
FRCRECGYASAQNCTLKSHYLRRH
Links
Other
C2H2 ZF
family TFs
Other
Protopolystoma xenopodis
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TTAC_0000074001
Hydatigera taeniaeformis
TTAC_0000074001
N
0.773
TsM_000226500
Taenia solium
TsM_000226500
N
0.773
TASK_0000831401
Taenia asiatica
TASK_0000831401
N
0.773