CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PXEA_0003149401
(
Protopolystoma xenopodis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
PXEA_0003149401
T155855_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PXEA_0003149401-mRNA-1
C2H2 ZF
436
458
YGCRECGKEFRILRYLEKHRRIH
PXEA_0003149401-mRNA-1
C2H2 ZF
464
486
YQCCFCGRQFNDWPNMNRHKRIH
Links
Other
C2H2 ZF
family TFs
Other
Protopolystoma xenopodis
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SCUD_0002104701
Schistosoma curassoni
SCUD_0002104701
N
0.797
SMTD_0000333901
Schistosoma mattheei
SMTD_0000333901
N
0.797
TRE_0000706901
Trichobilharzia regenti
TRE_0000706901
N
0.797
D915_10896
Fasciola hepatica
D915_10896
N
0.791
ECPE_0001296201
Echinostoma caproni
ECPE_0001296201
N
0.791