CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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scaffold56-EXSNAP2012.28
(
Pristionchus exspectatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
scaffold56-EXSNAP2012.28
T156109_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold56-EXSNAP2012.28
C2H2 ZF
21
43
YVCELCGKGFHQNGNYKNHKLTH
scaffold56-EXSNAP2012.28
C2H2 ZF
49
71
FKCQICNKAFHQTYNLAFHMHTH
scaffold56-EXSNAP2012.28
C2H2 ZF
77
100
FECVHCGKGFCRNFDLKKHVRKLH
Links
Other
C2H2 ZF
family TFs
Other
Pristionchus exspectatus
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SMUV_0000151901
Syphacia muris
SMUV_0000151901
N
0.781
scaffold498-EXSNAP2012.10
Pristionchus exspectatus
scaffold498-EXSNAP2012.10
N
0.775
WUBG_18193
Wuchereria bancrofti
WUBG_18193
N
0.767
EVEC_0000095301
Enterobius vermicularis
EVEC_0000095301
N
0.765
scaffold157-EXSNAP2012.14
Pristionchus exspectatus
scaffold157-EXSNAP2012.14
N
0.761