CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SMRZ_0000265101
(
Schistosoma margrebowiei
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SMRZ_0000265101
T156252_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMRZ_0000265101-mRNA-1
C2H2 ZF
183
205
YTCHFCGKLFPRSANLTRHIRTH
SMRZ_0000265101-mRNA-1
C2H2 ZF
211
234
YKCIHCPRSFSISSNLQRHIRNIH
SMRZ_0000265101-mRNA-1
C2H2 ZF
240
262
FHCNVCLKRFGQRANLERHVRNH
Links
Other
C2H2 ZF
family TFs
Other
Schistosoma margrebowiei
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A_05079
Schistosoma haematobium
A_05079
N
0.827
SCUD_0001754301
Schistosoma curassoni
SCUD_0001754301
N
0.827
SMTD_0000846801
Schistosoma mattheei
SMTD_0000846801
N
0.827
Smp_140980
Schistosoma mansoni
Smp_140980
N
0.819
TRE_0000584301
Trichobilharzia regenti
TRE_0000584301
N
0.808
csin105807
Clonorchis sinensis
csin105807
N
0.797
D915_02923
Fasciola hepatica
D915_02923
N
0.797
ECPE_0000558801
Echinostoma caproni
ECPE_0000558801
N
0.797
T265_00456
Opisthorchis viverrini
T265_00456
N
0.797
EmuJ_000802100
Echinococcus multilocularis
EmuJ_000802100
N
0.789
HDID_0000852301
Hymenolepis diminuta
HDID_0000852301
N
0.789
HmN_000106800
Hymenolepis microstoma
HmN_000106800
N
0.789
HNAJ_0000828701
Hymenolepis nana
HNAJ_0000828701
N
0.789
MCOS_0000303201
Mesocestoides corti
MCOS_0000303201
N
0.789
SPER_0001498501
Spirometra erinaceieuropaei
SPER_0001498501
N
0.789
SPER_0001816901
Spirometra erinaceieuropaei
SPER_0001816901
N
0.789
PXEA_0003340601
Protopolystoma xenopodis
PXEA_0003340601
N
0.781
SSLN_0001208601
Schistocephalus solidus
SSLN_0001208601
N
0.773
TASK_0000841801
Taenia asiatica
TASK_0000841801
N
0.773
TTAC_0000096601
Hydatigera taeniaeformis
TTAC_0000096601
N
0.773